All modules for which code is available

• VirtualMicrobes.Tree.PhyloTree
• VirtualMicrobes.data_tools.store
• VirtualMicrobes.environment.Environment
• VirtualMicrobes.environment.Grid
• VirtualMicrobes.event.Molecule
• VirtualMicrobes.event.Reaction
• VirtualMicrobes.mutate.Mutation
• VirtualMicrobes.plotting.Graphs
• VirtualMicrobes.post_analysis.lod
• VirtualMicrobes.post_analysis.network_funcs
• VirtualMicrobes.post_analysis.network_properties
• VirtualMicrobes.simulation.Simulation
• VirtualMicrobes.virtual_cell.Cell
• VirtualMicrobes.virtual_cell.Chromosome
• VirtualMicrobes.virtual_cell.Gene
• VirtualMicrobes.virtual_cell.Genome
• VirtualMicrobes.virtual_cell.GenomicElement
• VirtualMicrobes.virtual_cell.Identifier
• VirtualMicrobes.virtual_cell.PhyloUnit
• VirtualMicrobes.virtual_cell.Population
• VirtualMicrobes.virtual_cell.Sequence
• collections
• mock